Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby mud volcano, Barents Sea

Type Article
Date 2007-05
Language English
Author(s) Losekann Tina1, Knittel Katrin1, Nadalig Thierry2, Fuchs Bernhard1, Niemann Helge1, 3, Boetius Antje1, 3, 4, Amann Rudolf1
Affiliation(s) 1 : Max Planck Inst Marine Microbiol, D-28359 Bremen, Germany.
2 : IFREMER, Ctr Brest, F-29280 Plouzane, France.
3 : Alfred Wegener Inst Polar & Marine Res, D-27515 Bremerhaven, Germany.
4 : Int Univ Bremen, D-28759 Bremen, Germany.
Source Applied and environmental microbiology (0099-2240) (American society for microbiology), 2007-05 , Vol. 73 , N. 10 , P. 3348-3362
DOI 10.1128/AEM.00016-07
WOS© Times Cited 260
Abstract Submarine mud volcanoes are formed by expulsions of mud, fluids, and gases from deeply buried subsurface sources. They are highly reduced benthic habitats and often associated with intensive methane seepage. In this study, the microbial diversity and community structure in methane-rich sediments of the Haakon Mosby Mud Volcano (HMMV) were investigated by comparative sequence analysis of 16S rRNA genes and fluorescence in situ hybridization. In the active volcano center, which has a diameter of about 500 m, the main methane-consuming process was bacterial aerobic oxidation. In this zone, aerobic methanotrophs belonging to three bacterial clades closely affiliated with Methylobacter and Methylophaga species accounted for 56% +/- 8% of total cells. In sediments below Beggiatoa mats encircling the center of the HMMV, methanotrophic archaea of the ANME-3 clade dominated the zone of anaerobic methane oxidation. ANME-3 archaea form cell aggregates mostly associated with sulfate-reducing bacteria of the Desulfobulbus (DBB) branch. These ANME-3/DBB aggregates were highly abundant and accounted for up to 94% +/- 2% of total microbial biomass at 2 to 3 cm below the surface. ANME-3/DBB aggregates could be further enriched by How cytometry to identify their phylogenetic relationships. At the outer rim of the mud volcano, the seafloor was colonized by tubeworms (Siboglinidae, formerly known as Pogonophora). Here, both aerobic and anaerobic methane oxidizers were found, however, in lower abundances. The level of microbial diversity at this site was higher than that at the central and Beggiatoa species-covered part of the HMMV. Analysis of methyl-coenzyme M-reductase alpha subunit (mcrA) genes showed a strong dominance of a novel lineage, mcrA group f, which could be assigned to ANME-3 archaea. Our results further support the hypothesis of Niemann et al. (54), that high methane availability and different fluid flow regimens at the HMMV provide distinct niches for aerobic and anaerobic methanotrophs.
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Losekann Tina, Knittel Katrin, Nadalig Thierry, Fuchs Bernhard, Niemann Helge, Boetius Antje, Amann Rudolf (2007). Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby mud volcano, Barents Sea. Applied and environmental microbiology, 73(10), 3348-3362. Publisher's official version : https://doi.org/10.1128/AEM.00016-07 , Open Access version : https://archimer.ifremer.fr/doc/00000/2617/