FN Archimer Export Format
PT J
TI Shewanella profunda sp nov., isolated from deep marine sediment of the Nankai Trough
BT 
AF TOFFIN, Laurent
   BIDAULT, Adeline
   PIGNET, Patricia
   TINDALL, Brian
   SLOBODKIN, Alexander
   KATO, Chiaki
   PRIEUR, Daniel
AS 1:;2:;3:;4:;5:;6:;7:;
FF 1:;2:;3:PDG-DOP-DCB-EEP-LMEE;4:;5:;6:;7:;
C1 CNRS, UMR 6539, F-29280 Plouzane, France.
   Univ Bretagne Occidentale, Technopole Brest Iroise, F-29280 Plouzane, France.
   Japan Marine Sci & Technol Ctr, Marine Ecosyst Res Dept, Yokosuka, Kanagawa 2370061, Japan.
   IFREMER, Ctr Brest, Dept Valorisat Prod, Lab Microbiol & Biotechnol Extremophiles, F-29280 Plouzane, France.
   Deutsch Sammlung Mikroorganismen & Zellkulturen, D-38124 Braunschweig, Germany.
   Russian Acad Sci, Inst Microbiol, Moscow 117312, Russia.
C2 CNRS, FRANCE
   UBO, FRANCE
   JAMSTEC, JAPAN
   IFREMER, FRANCE
   DEUTSCH SAMMLUNG MIKROORGANISMEN & ZELLKULTUREN, GERMANY
   RUSSIAN ACAD SCI, RUSSIA
SI BREST
SE PDG-DOP-DCB-EEP-LMEE
IN WOS Ifremer jusqu'en 2018
   copubli-france
   copubli-europe
   copubli-univ-france
   copubli-int-hors-europe
IF 2.456
TC 54
UR https://archimer.ifremer.fr/doc/2004/publication-590.pdf
LA English
DT Article
DE ;Phylogeny;Bacteria;Microbiology;Deep sediment layer
AB A novel piezotolerant, mesophilic, facultatively anaerobic, organotrophic, polarly flagellated bacterium (strain LT13a(T)) was isolated from a deep sediment layer in the Nankai Trough (Leg 190, Ocean Drilling Program) off the coast of Japan. This organism used a wide range of organic substrates as sole carbon and energy sources: pyruvate, glutamate, succinate, fumarate, lactate, citrate, peptone and tryptone. Oxygen, nitrate, fumarate, ferric iron and cystine were used as electron acceptors. Maximal growth rates were observed at a hydrostatic pressure of 10 MPa. Hydrostatic pressure for growth was in the range 0.1-50 MPa. Predominant cellular fatty acids were 16:1 omega7c, 15: 0 iso, 16: 0 and 13: 0 iso. The G + C content of the DNA was 44.9 mol%. On the basis of 16S rRNA gene sequences, strain LT13a(T) was shown to belong to the gamma-Proteobacteria, being closely related to Shewanella putrefaciens (98%), Shewanella oneidensis (97%) and Shewanella baltica (96 %). Levels of DNA homology between strain LT13a(T) and S. putrefaciens, S. oneidensis and S. baltica were < 20 %, indicating that strain LT13a(T) represents a novel species. Genetic evidence and phenotypic characteristics showed that isolate LT13a(T) constitutes a novel species of the genus Shewanella, Because of the deep origin of the strain, the name Shewanella profunda sp. nov. is proposed, with LT13a(T) (= DSM 15900(T)-JCM 12080(T)) as the type strain.
PY 2004
PD NOV
SO International journal of systematic and evolutionary microbiology
SN 1466-5026
PU Society for General Microbiology
VL 54
IS 6
UT 000225366000008
BP 1943
EP 1949
DI 10.1099/ijs.0.03007-0
ID 590
ER

EF