FN Archimer Export Format PT J TI Strategy to design DNA-biosensors: Single-stranded probe grafting versus target-probe duplex grafting BT AF VEDRINE, C. LAZERGES, M. PERROT, H. COMPERE, Chantal PERNELLE, C. AS 1:2;2:1,3;3:1,3;4:4;5:2; FF 1:;2:;3:;4:PDG-REM-RDT-IC;5:; C1 Univ Paris 06, LISE, F-75252 Paris, France. CNAM, LC3B, F-75141 Paris 03, France. CNRS, UPR 15, Lab Interfaces & Syst Electrochim, F-75252 Paris, France. IFREMER, Ctr Brest, Serv Interfaces & Capteurs, F-29280 Plouzane, France. C2 UNIV PARIS 06, FRANCE CNAM, FRANCE CNRS, FRANCE IFREMER, FRANCE SI BREST SE PDG-REM-RDT-IC IN WOS Ifremer jusqu'en 2018 copubli-france copubli-univ-france IF 3.54 TC 1 UR https://archimer.ifremer.fr/doc/00101/21196/19416.pdf LA English DT Article DE ;Alexandrium minutum;Biosensor;Double-stranded DNA;Quartz crystal microbalance AB A strategy to design DNA-biosensors by grafting probe-target duplex onto a 27 MHz quartz crystal microbalance gold surface is presented in this work. The idea that removing the DNA target after duplex grafting yields to a well accessible probe, and therefore to efficient target recognition, is investigated. Unfortunately, hybridization efficiency measured using such a straightaway protocol is equal to 15%, which is feeble by comparison with the 31% hybridization efficiency measured for biosensors designed with single-stranded probe. Successive DNA biosensors are designed in this work, taking into account phenomena that occur specifically in an interfacial environment, like non specific adsorption or exchange reactions between adsorbed molecules. A DNA-biosensor with an optimized biolayer in terms of probe accessibility and probe surface density is in fine designed: a 59% hybridization efficiency, for a complementary target including a 20-base non complementary sequence oriented toward the surface, is obtained for the biosensor designed with target-probe duplex. This hybridization efficiency is 3 times to 18% measured for biosensors designed with single-stranded probe. (C) 2012 Elsevier B.V. All rights reserved. PY 2012 PD AUG SO Sensors And Actuators B-chemical SN 0925-4005 PU Elsevier Science Sa VL 171 UT 000308572700094 BP 719 EP 725 DI 10.1016/j.snb.2012.05.062 ID 21196 ER EF