FN Archimer Export Format
PT J
TI Complete genome sequence of acute viral necrosis virus associated with massive mortality outbreaks in the Chinese scallop, Chlamys farreri
BT 
AF REN, Weicheng
   CHEN, Haixia
   RENAULT, Tristan
   CAI, Yuyong
   BAI, Changming
   WANG, Chongming
   HUANG, Jie
AS 1:;2:;3:;4:;5:;6:;7:;
FF 1:;2:;3:PDG-RBE-SG2M;4:;5:;6:;7:;
C1 Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Maricultural Organism Dis Control & Pathogen Mol, Qingdao 266071, Peoples R China.
   Univ Gothenburg, Dept Rheumatol & Inflammat, S-40530 Gothenburg, Sweden.
   Univ Gothenburg, Dept Biol & Environm Sci, S-40530 Gothenburg, Sweden.
   Ifremer, Unite Sante Genet & Microgiol Mollusques, Lab Genet & Pathol Mollusques Marins, F-17390 La Tremblade, France.
C2 CHINESE ACAD FISHERY SCI, CHINA
   UNIV GOTHENBURG, SWEDEN
   UNIV GOTHENBURG, SWEDEN
   IFREMER, FRANCE
SI LA TREMBLADE
SE PDG-RBE-SG2M
IN WOS Ifremer jusqu'en 2018
   copubli-europe
   copubli-int-hors-europe
   copubli-sud
IF 2.089
TC 59
UR https://archimer.ifremer.fr/doc/00135/24620/22650.pdf
LA English
DT Article
DE ;Acute viral necrosis virus (AVNV);Herpesvirus;OsHV-1;Genome
AB Acute viral necrosis virus (AVNV) is the causative agent of a serious disease resulting in high mortality in cultured Chinese scallops, Chlamys farreri. We have sequenced and analyzed the complete genome of AVNV. The AVNV genome is a linear, double-stranded DNA molecule of 210,993 bp with a nucleotide composition of 38.5% G + C. A total of 123 open reading frames were predicted to encode functional proteins, ranging from 41 to 1,878 amino acid residues. The DNA sequence of AVNV is 97% identical to that of ostreid herpesvirus 1 (OsHV-1), and the amino acid sequences of the encoded proteins of these two viruses are 94-100% identical. The genomic organization of AVNV is similar to that of OsHV-1, and consists of two unique regions (170.4 kb and 3.4 kb, respectively), each flanked by two inverted repeats (7.6 kb and 10.2 kb, respectively), with a third unique region (1.5 kb) situated between the two internal repeats. Our results indicate that AVNV is a variant of OsHV-1. The AVNV genome sequence provides information useful for understanding the evolution and divergence of OsHV-1 in marine molluscs.
PY 2013
PD APR
SO Virology Journal
SN 1743-422X
PU Biomed Central Ltd
VL 10
UT 000317657000001
DI 10.1186/1743-422X-10-110
ID 24620
ER

EF