FN Archimer Export Format
PT J
TI Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards
BT 
AF TEN HOOPEN, Petra
   PESANT, Stephane
   KOTTMANN, Renzo
   KOPF, Anna
   BICAK, Mesude
   CLAUS, Simon
   DENEUDT, Klaas
   BORREMANS, Catherine
   THIJSSE, Peter
   DEKEYZER, Stefanie
   SCHAAP, Dick M. A.
   BOWLER, Chris
   GLOECKNER, Frank Oliver
   COCHRANE, Guy
AS 1:1;2:2;3:3;4:3;5:4;6:5;7:5;8:6;9:7;10:5;11:7;12:8;13:3,9;14:1;
FF 1:;2:;3:;4:;5:;6:;7:;8:PDG-IMN-IDM-SISMER;9:;10:;11:;12:;13:;14:;
C1 EMBL EBI, European Nucleotide Arch, Cambridge CB10 1SD, England.
   Univ Bremen, MARUM Ctr Marine Environm Sci, PANGAEA Data Publisher Earth & Environm Sci, D-28359 Bremen, Germany.
   Microbial Genom & Bioinformat Grp, Max Planck Inst Marine Microbial Ecol, D-28359 Bremen, Germany.
   Univ Oxford, Oxford E Res Ctr OeRC, Oxford, England.
   Vlaams Inst Voor Zee, B-8400 Oostende, Belgium.
   IDM SISMER, IFREMER Ctr BREST, F-29280 Plouzane, France.
   MARIS BV, NL-2273 JJ Voorburg, Netherlands.
   CNRS UMR8197 Inserm U1024, IBENS, Environm & Evolutionary Genom Sect, F-75005 Paris, France.
   Jacobs Univ Bremen gGmbH, D-28759 Bremen, Germany.
C2 EMBL EBI, UK
   UNIV BREMEN MARUM, GERMANY
   MAX PLANCK INST MARINE, GERMANY
   UNIV OXFORD, UK
   VLAAMS INST VOOR ZEE, BELGIUM
   IFREMER, FRANCE
   MARIS BV, NETHERLANDS
   IBENS, FRANCE
   UNIV JACOBS BREMEN, GERMANY
SI BREST
SE PDG-IMN-IDM-SISMER
IN WOS Ifremer jusqu'en 2018
   DOAJ
   copubli-france
   copubli-europe
IF 1.594
TC 14
UR https://archimer.ifremer.fr/doc/00311/42266/41588.pdf
LA English
DT Article
DE ;Data standard;Marine;Molecular;Biodiversity;Microbial;Bioinformatics;Reporting;Interoperability
AB Contextual data collected concurrently with molecular samples are critical to the use of metagenomics in the fields of marine biodiversity, bioinformatics and biotechnology. We present here Marine Microbial Biodiversity, Bioinformatics and Biotechnology (M2B3) standards for "Reporting" and "Serving" data. The M2B3 Reporting Standard (1) describes minimal mandatory and recommended contextual information for a marine microbial sample obtained in the epipelagic zone, (2) includes meaningful information for researchers in the oceanographic, biodiversity and molecular disciplines, and (3) can easily be adopted by any marine laboratory with minimum sampling resources. The M2B3 Service Standard defines a software interface through which these data can be discovered and explored in data repositories. The M2B3 Standards were developed by the European project Micro B3, funded under 7th Framework Programme "Ocean of Tomorrow", and were first used with the Ocean Sampling Day initiative. We believe that these standards have value in broader marine science.
PY 2015
PD MAY
SO Standards In Genomic Sciences
SN 1944-3277
PU Biomed Central Ltd
VL 10
IS 20
UT 000367986300001
BP 1
EP 10
DI 10.1186/s40793-015-0001-5
ID 42266
ER

EF