FN Archimer Export Format
PT J
TI Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
BT 
AF WANG, Mingxun
   CARVER, Jeremy J.
   PHELAN, Vanessa V.
   SANCHEZ, Laura M.
   GARG, Neha
   PENG, Yao
   WATROUS, Jeramie
   KAPONO, Clifford A.
   LUZZATTO-KNAAN, Tal
   PORTO, Carla
   BOUSLIMANI, Amina
   MELNIK, Alexey V.
   MEEHAN, Michael J.
   LIU, Wei -Ting
   CRIISEMANN, Max
   BOUDREAU, Paul D.
   ESQUENAZI, Eduardo
   SANDOVAL-CALDERON, Mario
   KERSTEN, Roland D.
   PACE, Laura A.
   QUINN, Robert A.
   DUNCAN, Katherine R.
   HSU, Cheng-Chih
   FLOROS, Dimitrios J.
   GAVILAN, Ronnie G.
   KLEIGREWE, Karin
   NORTHEN, Trent
   DUTTON, Rachel J.
   PARROT, Delphine
   CARLSON, Erin E.
   AIGLE, Bertrand
   MICHELSEN, Charlotte F.
   JELSBAK, Lars
   SOHLENKAMP, Christian
   PEVZNER, Pavel
   EDLUND, Anna
   MCLEAN, Jeffrey
   PIEL, Jorn
   MURPHY, Brian T.
   GERWICK, Lena
   LIAW, Chih-Chuang
   YANG, Yu-Liang
   HUMPF, Hans-Ulrich
   MAANSSON, Maria
   KEYZERS, Robert A.
   SIMS, Amy C.
   JOHNSON, Andrew R.
   SIDEBOTTOM, Ashley M.
   SEDIO, Brian E.
   KLITGAARD, Andreas
   LARSON, Charles B.
   BOYA P, Cristopher A.
   TORRES-MENDOZA, Daniel
   GONZALEZ, David J.
   SILVA, Denise B.
   MARQUES, Lucas M.
   DEMARQUE, Daniel P.
   POCIUTE, Egle
   O'NEILL, Ellis C.
   BRIAND, Enora
   HELFRICH, Eric J. N.
   GRANATOSKY, Eve A.
   GLUKHOV, Evgenia
   RYFFEL, Florian
   HOUSON, Hailey
   MOHIMANI, Hosein
   KHARBUSH, Jenan J.
   ZENG, Yi
   VORHOLT, Julia A.
   KURITA, Kenji L.
   CHARUSANTI, Pep
   MCPHAIL, Kerry L.
   NIELSEN, Kristian Fog
   VUONG, Lisa
   ELFEKI, Maryam
   TRAXLER, Matthew F.
   ENGENE, Niclas
   KOYAMA, Nobuhiro
   VINING, Oliver B.
   BARIC, Ralph
   SILVA, Ricardo R.
   MASCUCH, Samantha J.
   TOMASI, Sophie
   JENKINS, Stefan
   MACHERLA, Venkat
   HOFFMAN, Thomas
   AGARWAL, Vinayak
   WILLIAMS, Philip G.
   DAI, Jingqui
   NEUPANE, Ram
   GURR, Joshua
   RODRIGUEZ, Andres M. C.
   LAMSA, Anne
   ZHANG, Chen
   DORRESTEIN, Kathleen
   DUGGAN, Brendan M.
   ALMALITI, Jehad
   ALLARD, Pierre-Marie
   PHAPALE, Prasad
   NOTHIAS, Louis-Felix
   ALEXANDROVR, Theodore
   LITAUDON, Marc
   WOLFENDER, Jean-Luc
   KYLE, Jennifer E.
   METZ, Thomas O.
   PERYEA, Tyler
   VANLEER, Danielle
   SHINN, Paul
   JADHAV, Ajit
   MULLER, Rolf
   WATERS, Katrina M.
   SHI, Wenyuan
   LIU, Xueting
   ZHANG, Lixin
   KNIGHT, Rob
   JENSEN, Paul R.
   PALSSON, Bernhard O.
   POGLIANO, Kit
   LININGTON, Roger G.
   GUTIERREZ, Marcelino
   LOPES, Norberto P.
   GERWICK, William H.
   MOORE, Bradley S.
   DORRESTEIN, Pieter C.
   BANDEIRA, Nuno
AS 1:1,2;2:1,2;3:3;4:3;5:3;6:4;7:4;8:3;9:4;10:3;11:3;12:3;13:3;14:3;15:5;16:6;17:6;18:7;19:8;20:9;21:3;22:10;23:6,11;24:4;25:4;26:12;27:6;28:13;29:14;30:15;31:16;32:17;33:18;34:18;35:8;36:1,2;37:19,20;38:20,21;39:22;40:23;41:6;42:24;43:25;44:26;45:18;46:27,28;47:29;48:30;49:30;50:12,31;51:18;52:6,32;53:12;54:12;55:3,32;56:33,34;57:33;58:33;59:7;60:6;61:6,35;62:22;63:36;64:6;65:22;66:7;67:2;68:6;69:4;70:22;71:37;72:38;73:39;74:18;75:7;76:23;77:40;78:41;79:3;80:39;81:29;82:33;83:6;84:15;85:13;86:7;87:42;88:43;89:44;90:44;91:44;92:44;93:33;94:45;95:46;96:3;97:3;98:3;99:47;100:48;101:49;102:48;103:49;104:47;105:50;106:50;107:51;108:51;109:51;110:51;111:51;112:42;113:50;114:20;115:52;116:;117:53;118:6;119:38;120:45;121:37;122:12;123:33;124:3,6;125:3,6,43;126:3,6,32;127:2,3,32;
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C1 Univ Calif San Diego, Comp Sci & Engn, La Jolla, CA 92093 USA.
   Univ Calif San Diego, Ctr Computat Mass Spectrometry, La Jolla, CA USA.
   Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, Collaborat Mass Spectrometry Innovat Ctr, La Jolla, CA USA.
   Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA USA.
   Stanford Univ, Dept Microbiol & Immunol, Palo Alto, CA 94304 USA.
   Univ Calif San Diego, Scripps Inst Oceanog, Ctr Marine Biotechnol & Biomed, La Jolla, CA USA.
   Sirenas Marine Discovery, San Diego, CA USA.
   Univ Nacl Autonoma Mexico, Ctr Ciencias Genom, Cuernavaca, Morelos, Mexico.
   Salk Inst Biol Studies, La Jolla, CA USA.
   San Diego State Univ, Dept Biol, San Diego, CA 92182 USA.
   Scottish Marine Inst, Scottish Assoc Marine Sci, Oban, Argyll, Scotland.
   INDICASAT, Ctr Drug Discovery & Biodivers, City Of Knowledge, Panama.
   Lawrence Berkeley Natl Lab, Genome Dynam, Berkeley, CA USA.
   Harvard, FAS Ctr Syst Biol, Cambridge, MA USA.
   Univ Rennes 1, Prod Nat Synth Chim Med, Rennes, France.
   Univ Minnesota, Dept Chem, 207 Pleasant St SE, Minneapolis, MN 55455 USA.
   Univ Lorraine, Dynam Genomes & Adaptat Microbienne, Vandoeuvre Les Nancy, France.
   Tech Univ Denmark, Dept Syst Biol, Lyngby, Denmark.
   J Craig Venter Inst, Microbial & Environm Genom, La Jolla, CA USA.
   UC Los Angeles, Sch Dent, Los Angeles, CA USA.
   Univ Washington, Dept Periodont, Seattle, WA 98195 USA.
   Swiss Fed Inst Technol, Inst Microbiol, Zurich, Switzerland.
   Univ Illinois, Dept Med Chem & Pharmacognosy, Chicago, IL USA.
   Natl Sun Yat Sen Univ, Dept Marine Biotechnol & Resources, Kaohsiung, Taiwan.
   Acad Sinica, Agr Biotechnol Res Ctr, Taipei, Taiwan.
   Univ Munster, Inst Food Chem, Munster, Germany.
   Victoria Univ Wellington, Sch Chem & Phys Sci, Wellington, New Zealand.
   Victoria Univ Wellington, Ctr Biodiscovery, Wellington, New Zealand.
   Univ North Carolina Chapel Hill, Dept Epidemiol, Gillings Sch Global Publ Hlth, Chapel Hill, NC USA.
   Indiana Univ, Dept Chem, Bloomington, IN USA.
   Smithsonian Trop Res Inst, Ancon, Panama.
   Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA USA.
   Univ Sao Paulo, Sch Pharmaceut Sci Ribeirao Preto, Sao Paulo, Brazil.
   Univ Fed Mato Grosso do Sul, Ctr Ciencias Biol & Saude, Campo Grande, Brazil.
   Univ Rennes 1, CNRS, UMR 6553, ECOBIO, Rennes, France.
   Univ Notre Dame, Dept Chem & Biochem, Notre Dame, IN 46556 USA.
   UC Santa Cruz, PBSci Chem & Biochem Dept, Santa Cruz, CA USA.
   Univ Calif San Diego, Dept Bioengn, La Jolla, CA USA.
   Oregon State Univ, Coll Pharm, Dept Pharmaceut Sci, Corvallis, OR 97331 USA.
   Univ Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA USA.
   Florida Int Univ, Dept Biol Sci, Miami, FL 33199 USA.
   Helmholtz Inst Pharmaceut Res Saarland, Dept Pharmaceut Biotechnol, Saarbrucken, Germany.
   Univ Calif San Diego, Scripps Inst Oceanog, Ctr Oceans & Human Hlth, La Jolla, CA USA.
   Univ Hawaii Manoa, Dept Chem, Honolulu, HI 96822 USA.
   Univ Calif San Diego, Div Biol Sci, La Jolla, CA USA.
   Univ Calif San Diego, Dept Nanoengn, La Jolla, CA USA.
   Univ Geneva, Sch Pharmaceut Sci, Geneva, Switzerland.
   European Mol Biol Lab, Struct & Computat Biol, Heidelberg, Germany.
   Univ Paris Saclay, Labex CEBA, ICSN, CNRS,UPR 2301, Gif Sur Yvette, France.
   Pacific NW Natl Lab, Biol Sci, Richland, WA 99352 USA.
   NIH, Natl Ctr Adv Translat Sci, Rockville, MD USA.
   Chinese Acad Sci, Inst Microbiol, Beijing, Peoples R China.
   Univ Calif San Diego, Dept Pediat, La Jolla, CA USA.
C2 UNIV CALIF SAN DIEGO, USA
   UNIV CALIF SAN DIEGO, USA
   UNIV CALIF SAN DIEGO, USA
   UNIV CALIF SAN DIEGO, USA
   UNIV STANFORD, USA
   UNIV CALIF SAN DIEGO, USA
   SIRENAS MARINE DISCOVERY, USA
   UNIV UNAM, MEXICO
   SALK INST BIOL STUDIES, USA
   UNIV SAN DIEGO STATE, USA
   SCOTTISH MARINE INST, UK
   INDICASAT, PANAMA
   LAWRENCE BERKELEY NATL LAB, USA
   HARVARD, USA
   UNIV RENNES, FRANCE
   UNIV MINNESOTA, USA
   UNIV LORRAINE, FRANCE
   UNIV TECH DENMARK, DENMARK
   J CRAIG VENTER INST, USA
   UC LOS ANGELES, USA
   UNIV WASHINGTON, USA
   ETH ZURICH, SWITZERLAND
   UNIV ILLINOIS, USA
   NATL SUN YAT SEN UNIV, TAIWAN
   ACAD SINICA, TAIWAN
   UNIV MUNSTER, GERMANY
   VICTORIA UNIV WELLINGTON, NEW ZEALAND
   VICTORIA UNIV WELLINGTON, NEW ZEALAND
   UNIV NORTH CAROLINA CHAPEL HILL, USA
   INDIANA UNIV, USA
   SMITHSONIAN TROP RES INST, PANAMA
   UNIV CALIF SAN DIEGO, USA
   UNIV SAO PAULO, BRAZIL
   UNIV FED MATO GROSSO DO SUL, BRAZIL
   UNIV RENNES, FRANCE
   UNIV NOTRE DAME, USA
   UC SANTA CRUZ, USA
   UNIV CALIF SAN DIEGO, USA
   UNIV OREGON STATE, USA
   UNIV CALIF BERKELEY, USA
   FLORIDA INT UNIV, USA
   HELMHOLTZ INST PHARMACEUT RES SAARLAND, GERMANY
   UNIV CALIF SAN DIEGO, USA
   UNIV HAWAII MANOA, USA
   UNIV CALIF SAN DIEGO, USA
   UNIV CALIF SAN DIEGO, USA
   UNIV GENEVA, SWITZERLAND
   EMBL, GERMANY
   UNIV PARIS SACLAY, FRANCE
   PACIFIC NW NATL LAB, USA
   NIH, USA
   CHINESE ACAD SCI, CHINA
   UNIV CALIF SAN DIEGO, USA
IF 41.667
TC 2386
UR https://archimer.ifremer.fr/doc/00408/51939/52571.pdf
   https://archimer.ifremer.fr/doc/00408/51939/52572.pdf
   https://archimer.ifremer.fr/doc/00408/51939/52573.xlsx
   https://archimer.ifremer.fr/doc/00408/51939/52574.zip
LA English
DT Article
AB The potential of the diverse chemistries present in natural products (NP) for biotechnology and medicine remains untapped because NP databases are not searchable with raw data and the NP community has no way to share data other than in published papers. Although mass spectrometry (MS) techniques are well-suited to high-throughput characterization of NP, there is a pressing need for an infrastructure to enable sharing and curation of data. We present Global Natural Products Social Molecular Networking (GNPS; http://gnps.ucsd.edu), an open-access knowledge base for community-wide organization and sharing of raw, processed or identified tandem mass (MS/MS) spectrometry data. In GNPS, crowdsourced curation of freely available community-wide reference MS libraries will underpin improved annotations. Data-driven social-networking should facilitate identification of spectra and foster collaborations. We also introduce the concept of 'living data' through continuous reanalysis of deposited data. 
PY 2016
PD AUG
SO Nature Biotechnology
SN 1087-0156
PU Nature Publishing Group
VL 34
IS 8
UT 000381339600019
BP 828
EP 837
DI 10.1038/nbt.3597
ID 51939
ER

EF