FN Archimer Export Format
PT J
TI Genome and metabolic network of "Candidatus Phaeomarinobacter ectocarpi" Ec32, a new candidate genus of Alphaproteobacteria frequently associated with brown algae
BT 
AF DITTAMI, Simon M.
   BARBEYRON, Tristan
   BOYEN, Catherine
   CAMBEFORT, Jeanne
   COLLET, Guillaume
   DELAGE, Ludovic
   GOBET, Angelique
   GROISILLIER, Agnes
   LEBLANC, Catherine
   MICHEL, Gurvan
   SCORNET, Delphine
   SIEGEL, Anne
   TAPIA, Javier E.
   TONON, Thierry
AS 1:1,2;2:1,2;3:1,2;4:3,4,5;5:3,4,5;6:1,2;7:1,2;8:1,2;9:1,2;10:1,2;11:1,2;12:3,4,5;13:2,6;14:1,2;
FF 1:;2:;3:;4:;5:;6:;7:;8:;9:;10:;11:;12:;13:;14:;
C1 Univ Paris 06, UMR 8227, Univ Paris 04, Stn Biol Roscoff, Roscoff, France.
   CNRS, Stn Biol Roscoff, UMR 8227, F-29688 Roscoff, France.
   CNRS, IRISA UMR 6074, F-29688 Roscoff, France.
   Univ Rennes 1, IRISA UMR 6074, Rennes, France.
   INRIA, Ctr Rennes Bretagne Atlantique, Rennes, France.
   Pontificia Univ Catolica Chile, Fac Ciencias Biol, Dept Ecol, Santiago, Chile.
C2 UNIV PARIS 06, FRANCE
   CNRS, FRANCE
   CNRS, FRANCE
   UNIV RENNES, FRANCE
   INRIA, FRANCE
   PONTIFICIA UNIV CATOLICA CHILE, CHILE
IF 3.789
TC 19
UR https://archimer.ifremer.fr/doc/00488/59944/63183.pdf
   https://archimer.ifremer.fr/doc/00488/59944/63184.pdf
   https://archimer.ifremer.fr/doc/00488/59944/63185.pdf
   https://archimer.ifremer.fr/doc/00488/59944/63186.xlsx
   https://archimer.ifremer.fr/doc/00488/59944/63187.xlsx
LA English
DT Article
AB Rhizobiales and related orders of Alphaproteobacteria comprise several genera of nodule-inducing symbiotic bacteria associated with plant roots. Here we describe the genome and the metabolic network of "Candidatus Phaeomarinobacter ectocarpi" Ec32, a member of a new candidate genus closely related to Rhizobiales and found in association with cultures of the filamentous brown algal model Ectocarpus. The "Ca. P. ectocarpi" genome encodes numerous metabolic pathways that may be relevant for this bacterium to interact with algae. Notably, it possesses a large set of glycoside hydrolases and transporters, which may serve to process and assimilate algal metabolites. It also harbors several proteins likely to be involved in the synthesis of algal hormones such as auxins and cytokinins, as well as the vitamins pyridoxine, biotin, and thiamine. As of today, "Ca. P. ectocarpi" has not been successfully cultured, and identical 16S rDNA sequences have been found exclusively associated with Ectocarpus. However, related sequences (>= 97% identity) have also been detected free-living and in a Fucus vesiculosus microbiome barcoding project, indicating that the candidate genus "Phaeomarinobacter" may comprise several species, which may colonize different niches. 
PY 2014
PD JUN
SO Frontiers In Genetics
SN 1664-8021
PU Frontiers Media Sa
VL 5
IS 241
UT 000347227000001
DI 10.3389/fgene.2014.00241
ID 59944
ER

EF