FN Archimer Export Format
PT J
TI RAD sequencing sheds new light on the genetic structure and local adaptation of European scallops and resolves their demographic histories
BT 
AF Vendrami, David L. J.
   De Noia, Michele
   Telesca, Luca
   Handal, William
   Charrier, Gregory
   Boudry, Pierre
   Eberhart-Phillips, Luke
   Hoffman, Joseph I.
AS 1:1;2:1,2;3:3,4;4:5;5:5;6:6;7:7;8:1,4;
FF 1:;2:;3:;4:;5:;6:PDG-RBE-PFOM;7:;8:;
C1 Department of Animal Behavior, University of Bielefeld, Postfach 100131, 33615, Bielefeld, Germany
   Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
   Department of Earth Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EQ, United Kingdom
   British Antarctic Survey, High Cross, Madingley Road, Cambridge, CB3 OET, United Kingdom
   University of Brest, Laboratoire des Sciences de l’Environnement Marin (LEMAR, UMR 6539, UBO/CNRS/IRD/Ifremer), European University Institute for the Sea (IUEM), rue Dumont d’Urville, 29280, Plouzané, France
   Ifremer, Laboratoire des Sciences de l’Environnement Marin (UBO/CNRS/IRD/Ifremer), Plouzané, France
   Department of Evolutionary Ecology and Behavioural Genetics, Max Planck Institute for Ornithology, Seewiesen, Germany
C2 UNIV BIELEFELD, GERMANY
   UNIV GLASGOW, UK
   UNIV CAMBRIDGE, UK
   BRITISH ANTARCTIC SURVEY, UK
   UBO, FRANCE
   IFREMER, FRANCE
   MAX PLANCK INST ORNITHO, GERMANY
SI BREST
SE PDG-RBE-PFOM
UM LEMAR
IN WOS Ifremer UMR
   WOS Cotutelle UMR
   DOAJ
   copubli-france
   copubli-europe
   copubli-univ-france
IF 3.998
TC 33
UR https://archimer.ifremer.fr/doc/00497/60901/64240.pdf
   https://archimer.ifremer.fr/doc/00497/60901/64241.pdf
LA English
DT Article
AB Recent developments in genomics are advancing our understanding of the processes shaping population structure in wild organisms. In particular, reduced representation sequencing has facilitated the generation of dense genetic marker datasets that provide greater power for resolving population structure, investigating the role of selection and reconstructing demographic histories. We therefore used RAD sequencing to study the great scallop Pecten maximus and its sister species P. jacobeus along a latitudinal cline in Europe. Analysis of 219 samples genotyped at 82,439 single nucleotide polymorphisms clearly resolved an Atlantic and a Norwegian group within P. maximus as well as P. jacobeus, in support of previous studies. Fine-scale structure was also detected, including pronounced differences involving Mulroy Bay in Ireland, where scallops are commercially cultured. Furthermore, we identified a suite of 279 environmentally associated loci that resolved a contrasting phylogenetic pattern to the remaining neutral loci, consistent with ecologically mediated divergence. Finally, demographic inference provided support for the two P. maximus groups having diverged during the last glacial maximum and subsequently expanded, whereas P. jacobeus diverged around 95,000 generations ago and experienced less pronounced expansion. Our results provide an integrative perspective on the factors shaping genome-wide differentiation in a commercially important marine invertebrate. 
PY 2019
PD MAY
SO Scientific Reports
SN 2045-2322
PU Springer Science and Business Media LLC
VL 9
IS 1
UT 000468025300051
DI 10.1038/s41598-019-43939-4
ID 60901
ER

EF