FN Archimer Export Format
PT J
TI Species specific gene expression dynamics during harmful algal blooms
BT 
AF Metegnier, Gabriel
   Paulino, Sauvann
   Ramond, Pierre
   Siano, Raffaele
   Sourisseau, Marc
   Destombe, Christophe
   Le Gac, Mickael
AS 1:1,2;2:1;3:1,3;4:1;5:1;6:2;7:1;
FF 1:PDG-ODE-DYNECO-PELAGOS;2:;3:PDG-ODE-DYNECO-PELAGOS;4:PDG-ODE-DYNECO-PELAGOS;5:PDG-ODE-DYNECO-PELAGOS;6:;7:PDG-ODE-DYNECO-PELAGOS;
C1 French Research Institute for Exploitation of the Sea, Ifremer DYNECO PELAGOS, 29280, Plouzané, France
   CNRS, Sorbonne Université, UC, UaCh, UMI 3614, Evolutionary Biology and Ecology of Algae, Station Biologique de Roscoff, CS 90074, 29688, Roscoff, France
   CNRS, Sorbonne Université, UMR 7144, Station Biologique de Roscoff, CS90074, 29688, Roscoff Cedex, France
C2 IFREMER, FRANCE
   CNRS, FRANCE
   CNRS, FRANCE
SI BREST
SE PDG-ODE-DYNECO-PELAGOS
IN WOS Ifremer UPR
   DOAJ
   copubli-france
IF 4.379
TC 8
UR https://archimer.ifremer.fr/doc/00622/73390/72602.pdf
   https://archimer.ifremer.fr/doc/00622/73390/72603.pdf
   https://archimer.ifremer.fr/doc/00622/73390/72604.xlsx
   https://archimer.ifremer.fr/doc/00622/73390/72605.xlsx
LA English
DT Article
AB Harmful algal blooms are caused by specific members of microbial communities. Understanding the dynamics of these events requires comparing the strategies developed by the problematic species to cope with environmental fluctuations to the ones developed by the other members of the community. During three consecutive years, the meta-transcriptome of micro-eukaryote communities was sequenced during blooms of the toxic dinoflagellate Alexandrium minutum. The dataset was analyzed to investigate species specific gene expression dynamics. Major shifts in gene expression were explained by the succession of different species within the community. Although expression patterns were strongly correlated with fluctuation of the abiotic environment, and more specifically with nutrient concentration, transcripts specifically involved in nutrient uptake and metabolism did not display extensive changes in gene expression. Compared to the other members of the community, A. minutum displayed a very specific expression pattern, with lower expression of photosynthesis transcripts and central metabolism genes (TCA cycle, glucose metabolism, glycolysis…) and contrasting expression pattern of ion transporters across environmental conditions. These results suggest the importance of mixotrophy, cell motility and cell-to-cell interactions during A. minutum blooms. 
PY 2020
PD APR
SO Scientific Reports
SN 2045-2322
PU Springer Science and Business Media LLC
VL 10
IS 1
UT 000559946700015
DI 10.1038/s41598-020-63326-8
ID 73390
ER

EF