FN Archimer Export Format
PT J
TI MetaPopGen 2.0: A multilocus genetic simulator to model populations of large size
BT 
AF Andrello, Marco
   Noirot, Christelle
   Débarre, Florence
   Manel, Stéphanie
AS 1:1;2:2;3:3;4:2;
FF 1:;2:;3:;4:;
C1 MARBEC Univ Montpellier CNRS Sète, France
   CEFE Univ Montpellier CNRS EPHE‐PSL University IRD Univ Paul Valéry Montpellier 3 Montpellier ,France
   Sorbonne Université CNRS INRAE UPEC Univ. de Paris Institut d’Ecologie et des Sciences de l’Environnement de Paris (iEES‐Paris) Paris, France
C2 IRD, FRANCE
   UNIV MONTPELLIER, FRANCE
   UNIV SORBONNE, FRANCE
UM MARBEC
IN WOS Cotutelle UMR
   copubli-france
   copubli-univ-france
IF 8.678
TC 0
UR https://archimer.ifremer.fr/doc/00654/76565/77694.pdf
LA English
DT Article
DE ;adaptation;connectivity;dispersal;genetic simulator;landscape genetics
AB Multi‐locus genetic processes in subdivided populations can be complex and difficult to interpret using theoretical population genetics models. Genetic simulators offer a valid alternative to study multi‐locus genetic processes in arbitrarily complex scenarios. However, the use of forward‐in‐time simulators in realistic scenarios involving high numbers of individuals distributed in multiple local populations is limited by computation time and memory requirements. These limitations increase with the number of simulated individuals. We developed a genetic simulator, MetaPopGen 2.0, to model multi‐locus population genetic processes in subdivided populations of arbitrarily large size. It allows for spatial and temporal variation in demographic parameters, age structure, adult and propagule dispersal, variable mutation rates and selection on survival and fecundity. We developed MetaPopGen 2.0 in the R environment to facilitate its use by non‐modeler ecologists and evolutionary biologists. We illustrate the capabilities of MetaPopGen 2.0 for studying adaptation to water salinity in the striped red mullet Mullus surmuletus. 
PY 2021
PD FEB
SO Molecular Ecology Resources
SN 1755-098X
PU Wiley
VL 21
IS 2
UT 000590613600001
BP 596
EP 608
DI 10.1111/1755-0998.13270
ID 76565
ER

EF