FN Archimer Export Format PT J TI Genomic architecture and introgression shape a butterfly radiation BT AF EDELMAN, Nathaniel B. FRANDSEN, Paul B. MIYAGI, Michael CLAVIJO, Bernardo DAVEY, John DIKOW, Rebecca B. GARCIA-ACCINELLI, Gonzalo VAN BELLEGHEM, Steven M. PATTERSON, Nick NEAFSEY, Daniel E. CHALLIS, Richard KUMAR, Sujai MOREIRA, Gilson R. P. SALAZAR, Camilo CHOUTEAU, Mathieu COUNTERMAN, Brian A. PAPA, Riccardo BLAXTER, Mark REED, Robert D. DASMAHAPATRA, Kanchon K. KRONFORST, Marcus JORON, Mathieu JIGGINS, Chris D. MCMILLAN, W. Owen DI PALMA, Federica BLUMBERG, Andrew J. WAKELEY, John JAFFE, David MALLET, James AS 1:1;2:2,3;3:1;4:4;5:5;6:3;7:4;8:6;9:7,8;10:8,9;11:10;12:11;13:12;14:13;15:14;16:15;17:16;18:10;19:17;20:;21:18;22:19;23:20;24:21;25:4;26:22;27:;28:23;29:1; FF 1:;2:;3:;4:;5:;6:;7:;8:;9:;10:;11:;12:;13:;14:;15:;16:;17:;18:;19:;20:;21:;22:;23:;24:;25:;26:;27:;28:;29:; C1 Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA. Brigham Young Univ, Dept Plant & Wildlife Sci, Provo, UT 84602 USA. Smithsonian Inst, Data Sci Lab, Off Chief Informat Officer, Washington, DC 20560 USA. Earlham Inst, Res Pk, Norwich NR4 7UZ, Norfolk, England. Univ York, Dept Biol, Biosci Technol Facil, York YO10 5DD, N Yorkshire, England. Univ Puerto Rico, Dept Biol, Rio Piedras Campus, Rio Piedras, PR 00931 USA. Harvard Univ, Dept Human Evolutionary Biol, Cambridge, MA 02138 USA. Broad Inst MIT & Harvard, Cambridge, MA 02142 USA. Harvard TH Chan Sch Publ Hlth, Boston, MA 02115 USA. Wellcome Sanger Inst, Wellcome Genome Campus, Cambridge CB10 1SA, England. Univ Edinburgh, Inst Evolutionary Biol, Edinburgh EH9 3JT, Midlothian, Scotland. Univ Fed Rio Grande, Dept Zool, BR-91501970 Porto Alegre, RS, Brazil. Univ Rosario, Fac Nat Sci & Math, Biol Program, Carrera 24, Bogota 111221, Colombia. Laboratoire Ecologie, Evolution, Interactions des Systèmes Amazoniens (LEEISA), USR 3456, Université De Guyane, CNRS Guyane, 275 Route de Montabo, 97334 Cayenne, French Guiana Mississippi State Univ, Dept Biol Sci, Starkville, MS 39762 USA. Univ Puerto Rico, Mol Sci & Res Ctr, San Juan, PR 00931 USA. Cornell Univ, Dept Ecol & Evolutionary Biol, Ithaca, NY 14853 USA. Univ Chicago, Dept Ecol & Evolut, Chicago, IL 60637 USA. Univ Montpellier, Univ Paul Valery Montpellier 3, CEFE,CNRS, EPHE,IRD, F-34090 Montpellier, France. Univ Cambridge, Dept Zool, Cambridge CB2 3EJ, England. Smithsonian Trop Res Inst, Apartado 0843-03092, Panama City, Panama. Univ Texas, Dept Math, Austin, TX 78712 USA. 10x Genom, Pleasanton, CA 94566 USA. C2 UNIV HARVARD, USA UNIV BRIGHAM YOUNG, USA NMNH SMITHSONIAN INST, USA EARLHAM INST, UK UNIV YORK, UK UNIV PUERTO RICO, USA UNIV HARVARD, USA BROAD INST MIT & HARVARD, USA HARVARD TH CHAN SCH PUBL HLTH, USA WELLCOME SANGER INST, UK UNIV EDINBURGH, UK UNIV FED RIO GRANDE, BRAZIL UNIV ROSARIO, COLOMBIA UNIV GUYANE, FRANCE UNIV MISSISSIPPI STATE, USA UNIV PUERTO RICO, USA UNIV CORNELL, USA UNIV CHICAGO, USA UNIV MONTPELLIER, FRANCE UNIV CAMBRIDGE, UK SMITHSONIAN TROP RES INST, PANAMA UNIV TEXAS, USA 10X GENOM, USA UM LEEISA IN WOS Cotutelle UMR copubli-france copubli-europe copubli-univ-france copubli-int-hors-europe copubli-sud IF 41.845 TC 240 UR https://archimer.ifremer.fr/doc/00659/77116/78540.pdf https://archimer.ifremer.fr/doc/00659/77116/78541.pdf LA English DT Article AB We used 20 de novo genome assemblies to probe the speciation history and architecture of gene flow in rapidly radiating Heliconius butterflies. Our tests to distinguish incomplete lineage sorting from introgression indicate that gene flow has obscured several ancient phylogenetic relationships in this group over large swathes of the genome. Introgressed loci are underrepresented in low-recombination and gene-rich regions, consistent with the purging of foreign alleles more tightly linked to incompatibility loci. Here, we identify a hitherto unknown inversion that traps a color pattern switch locus. We infer that this inversion was transferred between lineages by introgression and is convergent with a similar rearrangement in another part of the genus. These multiple de novo genome sequences enable improved understanding of the importance of introgression and selective processes in adaptive radiation. PY 2019 PD NOV SO Science SN 0036-8075 PU Amer Assoc Advancement Science VL 366 IS 6465 UT 000494465700041 BP 594 EP 599 DI 10.1126/science.aaw2090 ID 77116 ER EF