FN Archimer Export Format
PT J
TI A global ocean atlas of eukaryotic genes
BT 
AF CARRADEC, Quentin
   PELLETIER, Eric
   DA SILVA, Corinne
   ALBERTI, Adriana
   SEELEUTHNER, Yoann
   BLANC-MATHIEU, Romain
   LIMA-MENDEZ, Gipsi
   ROCHA, Fabio
   TIRICHINE, Leila
   LABADIE, Karine
   KIRILOVSKY, Amos
   BERTRAND, Alexis
   ENGELEN, Stefan
   MADOUI, Mohammed-Amin
   MEHEUST, Raphael
   POULAIN, Julie
   ROMAC, Sarah
   RICHTER, Daniel J.
   YOSHIKAWA, Genki
   DIMIER, Celine
   KANDELS-LEWIS, Stefanie
   PICHERAL, Marc
   SEARSON, Sarah
   JAILLON, Olivier
   AURY, Jean-Marc
   KARSENTI, Eric
   SULLIVAN, Matthew B.
   SUNAGAWA, Shinichi
   BORK, Peer
   NOT, Fabrice
   HINGAMP, Pascal
   RAES, Jeroen
   GUIDI, Lionel
   OGATA, Hiroyuki
   DE VARGAS, Colomban
   IUDICONE, Daniele
   BOWLER, Chris
   WINCKER, Patrick
AS 1:1,2,3;2:1,2,3;3:1;4:1;5:1,2,3;6:4;7:5,6,23,24;8:7;9:7;10:1;11:1,2,3,7;12:1;13:1;14:1,2,3;15:7;16:1;17:8,9,13;18:8,9;19:4;20:7,8,9;21:10,11;22:12;23:;24:1,2,3;25:1;26:7,11,12;27:14,15;28:10,16;29:10,17,18,19,20;30:8,9;31:21;32:5,6;33:12,13;34:4;35:8,9;36:22;37:7;38:1,2,3;39:;
FF 1:;2:;3:;4:;5:;6:;7:;8:;9:;10:;11:;12:;13:;14:;15:;16:;17:;18:;19:;20:;21:;22:;23:;24:;25:;26:;27:;28:;29:;30:;31:;32:;33:;34:;35:;36:;37:;38:;39:;
C1 CEA, Inst Biol Francois Jacob, Genoscope, F-91057 Evry, France.
   CNRS, UMR Metab Genom, F-91057 Evry, France.
   Univ Evry, F-91057 Evry, France.
   Kyoto Univ, Inst Chem Res, Uji, Kyoto 6110011, Japan.
   Katholieke Univ Leuven, Rega Inst, Dept Microbiol & Immunol, Herestr 49, B-3000 Leuven, Belgium.
   VIB Ctr Microbiol, Herestr 49, B-3000 Leuven, Belgium.
   PSL Res Univ, Ecole Normale Super, IBENS, CNRS UMR 8197,INSERM,U1024, 46 Rue Ulm, F-75005 Paris, France.
   CNRS, UMR 7144, Stn Biol Roscoff, Pl Georges Teissier, F-29680 Roscoff, France.
   UPMC Univ Paris 06, Sorbonne Univ, Stn Biol Roscoff, UMR 7144, Pl Georges Teissier, F-29680 Roscoff, France.
   European Mol Biol Lab, Struct & Computat Biol, Meyerhofstr 1, D-69117 Heidelberg, Germany.
   European Mol Biol Lab, Directors Res, Meyerhofstr 1, D-69117 Heidelberg, Germany.
   UPMC Univ Paris 06, CNRS, Sorbonne Univ, LOV,Observ Oceanol, F-06230 Villefranche Sur Mer, France.
   Univ Hawaii, Dept Oceanog, Honolulu, HI 96844 USA.
   Ohio State Univ, Dept Microbiol, Columbus, OH 43210 USA.
   Ohio State Univ, Dept Civil Environm & Geodet Engn, Columbus, OH 43210 USA.
   Inst Microbiol, Dept Biol, Vladimir Prelog Weg 4, CH-8093 Zurich, Switzerland.
   Heidelberg Univ, Mol Med Partnership Unit, D-69120 Heidelberg, Germany.
   European Mol Biol Lab, D-69120 Heidelberg, Germany.
   Max Delbruck Ctr Mol Med, D-13125 Berlin, Germany.
   Univ Wurzburg, Dept Bioinformat, D-97074 Wurzburg, Germany.
   Univ Toulon & Var, Aix Marseille Univ, CNRS, IRD,MIO, F-13284 Marseille, France.
   Villa Comunale, Stn Zool Anton Dohrn, I-80121 Naples, Italy.
   Univ Libre Bruxelles, Fac Sci, Cellular & Mol Microbiol, Brussels, Belgium.
   ULB VUB, Interuniv Inst Bioinformat Brussels, Blvd Triomphe CP 263, B-1050 Brussels, Belgium.
C2 CEA, FRANCE
   CNRS, FRANCE
   UNIV EVRY, FRANCE
   UNIV KYOTO, JAPAN
   UNIV KATHOLIEKE LEUVEN, BELGIUM
   VIB CTR MICROBIOL, BELGIUM
   ENS, FRANCE
   CNRS, FRANCE
   UNIV PARIS 06, FRANCE
   EMBL, GERMANY
   EMBL, GERMANY
   UNIV PARIS 06, FRANCE
   UNIV HAWAII, USA
   UNIV OHIO STATE, USA
   UNIV OHIO STATE, USA
   INST MICROBIOL, SWITZERLAND
   UNIV HEIDELBERG, GERMANY
   EMBL, GERMANY
   MAX DELBRUCK CTR MOL MED, GERMANY
   UNIV WURZBURG, GERMANY
   UNIV TOULON, FRANCE
   VILLA COMUNALE, ITALY
   UNIV LIBRE BRUXELLES, BELGIUM
   UNIV LIBRE BRUXELLES, BELGIUM
IN DOAJ
IF 11.878
TC 192
UR https://archimer.ifremer.fr/doc/00660/77232/79053.pdf
   https://archimer.ifremer.fr/doc/00660/77232/79054.pdf
   https://archimer.ifremer.fr/doc/00660/77232/79055.pdf
   https://archimer.ifremer.fr/doc/00660/77232/79056.xlsx
   https://archimer.ifremer.fr/doc/00660/77232/79057.xlsx
   https://archimer.ifremer.fr/doc/00660/77232/79058.xlsx
   https://archimer.ifremer.fr/doc/00660/77232/79059.xlsx
   https://archimer.ifremer.fr/doc/00660/77232/79060.xlsx
   https://archimer.ifremer.fr/doc/00660/77232/79061.xlsx
   https://archimer.ifremer.fr/doc/00660/77232/79062.xlsx
   https://archimer.ifremer.fr/doc/00660/77232/79063.xlsx
LA English
DT Article
AB While our knowledge about the roles of microbes and viruses in the ocean has increased tremendously due to recent advances in genomics and metagenomics, research on marine microbial eukaryotes and zooplankton has benefited much less from these new technologies because of their larger genomes, their enormous diversity, and largely unexplored physiologies. Here, we use a metatranscriptomics approach to capture expressed genes in open ocean Tara Oceans stations across four organismal size fractions. The individual sequence reads cluster into 116 million unigenes representing the largest reference collection of eukaryotic transcripts from any single biome. The catalog is used to unveil functions expressed by eukaryotic marine plankton, and to assess their functional biogeography. Almost half of the sequences have no similarity with known proteins, and a great number belong to new gene families with a restricted distribution in the ocean. Overall, the resource provides the foundations for exploring the roles of marine eukaryotes in ocean ecology and biogeochemistry. 
PY 2018
PD JAN
SO Nature Communications
SN 2041-1723
PU Nature Publishing Group
VL 9
IS 373
UT 000423424800008
DI 10.1038/s41467-017-02342-1
ID 77232
ER

EF