FN Archimer Export Format
PT J
TI Two parallel chromosome-level reference genomes to support restoration and aquaculture of European flat oyster Ostrea edulis
BT 
AF Bean, Tim P
   Tanguy, Arnaud
   Penaloza, Carolina
   Gundappa, Manu Kumar
   Boutet, Isabelle
   Houston, Ross D
   Macqueen, Daniel J
   BOUDRY, Pierre
AS 1:1;2:2;3:1;4:1;5:2;6:1;7:1;8:3;
FF 1:;2:;3:;4:;5:;6:;7:;8:PDG-RBE;
C1 The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush Campus, Edinburgh, UK
   CNRS, UMR 7144, Station Biologique de Roscoff, Sorbonne Université, Roscoff, France
   Département Ressources Biologiques et Environnement, Ifremer, Plouzané, France
C2 UNIV EDINBURGH, UK
   CNRS, FRANCE
   IFREMER, FRANCE
SI BREST
SE PDG-RBE
IN WOS Ifremer UPR
   DOAJ
   copubli-france
   copubli-europe
IF 4.1
TC 3
UR https://archimer.ifremer.fr/doc/00788/90036/95615.pdf
LA English
DT Article
DE ;aquaculture;bivalve;genomics;mollusc;restoration;shellfish
AB This volume of Evolutionary Applications sees the publication of two genomes for the European native flat oyster Ostrea edulis, a species of significant evolutionary, ecological and commercial value. Each is a highly contiguous chromosome-level assembly from individuals of different genetic backgrounds, which have been benchmarked against one another. This situation has resulted from the serendipitous discovery that two independent research groups were both deep into the process of building, annotating and investigating separately produced assemblies. Due to constraints with funder requirements and the need to recognize early career researchers for their work, alongside the technical challenge of integrating assemblies from two very different genomes, there was limited capacity to merge the sequences into one publication at the stage of discovery. This issue is likely to become very common over the next few years until the technologies for working with multiple genomes at once, for example, graph genomes, become commonplace in nonmodel species. Consequently, both of our teams have decided to collaborate rather than compete, recognizing the benefit to copublishing two separate genome resources for the research community, each with distinct scientific investigations, and working collaboratively to benchmark the assemblies. 
PY 2022
PD NOV
SO Evolutionary Applications
SN 1752-4571
PU Wiley Open Access
VL 15
IS 11
UT 000841004300001
BP 1709
EP 1712
DI 10.1111/eva.13465
ID 90036
ER

EF