FN Archimer Export Format PT J TI Emergence and clonal expansion of Vibrio aestuarianus lineages pathogenic for oysters in Europe BT AF Mesnil, Aurelie Jacquot, Maude Garcia, Celine Tourbiez, Delphine Canier, Lydie Bidois, Audrey Dégremont, Lionel Cheslett, Deborah Geary, Michelle Vetri, Alessia Roque, Ana Furones, Dolors Garden, Alison Orozova, Petya Arzul, Isabelle Sicard, Mathieu CHARRIERE, Guillaume DESTOUMIEUX GARZON, Delphine TRAVERS, Agnes AS 1:1,10;2:1;3:1;4:1;5:1;6:10;7:1;8:3;9:3;10:4;11:5;12:5;13:6;14:7;15:1;16:8;17:10;18:9;19:2; FF 1:PDG-RBE-ASIM;2:PDG-RBE-ASIM;3:PDG-RBE-ASIM;4:PDG-RBE-ASIM;5:PDG-RBE-ASIM;6:;7:PDG-RBE-ASIM;8:;9:;10:;11:;12:;13:;14:;15:PDG-RBE-ASIM;16:;17:;18:;19:PDG-RBE-IHPE; C1 ASIM, Ifremer, Station de La Tremblade, avenue de Mus du Loup, 17390 La Tremblade, France IHPE Université de Montpellier, CNRS, IFREMER, Univ Perpignan Via Domitia Montpellier, France Marine Institute MI, Rinville Oranmore Co. Galway, Ireland InstitutoZooprofilatticoSperimentale delle Venezie (IZSVe), Vialedell’Università 10, 35020 Legnaro (PD) ,Italy IRTA La Ràpita. Aquaculture Program. 43540 – San Carles de la Ràpita ,Spain Marine Laboratory, Marine Scotland Science Aberdeen, UK National Diagnostic and Research Veterinary Medical Institute Sofia, Bulgaria ISEM Université de Montpellier, CNRS, IRD Montpellier, France IHPE Université de Montpellier, CNRS, IFREMER, Univ Perpignan Via Domitia Montpellier, France IHPE Université de Montpellier, CNRS, IFREMER, Univ Perpignan Via Domitia Montpellier, France C2 IFREMER, FRANCE IFREMER, FRANCE MARINE INST, IRELAND IZSVE, ITALY IRTA, SPAIN MARINE SCOTLAND SCI, UK NDRVMI, BULGARIA UNIV MONTPELLIER, FRANCE CNRS, FRANCE UNIV MONTPELLIER, FRANCE SI LA TREMBLADE MONTPELLIER SE PDG-RBE-ASIM PDG-RBE-IHPE UM IHPE IN WOS Ifremer UPR WOS Ifremer UMR WOS Cotutelle UMR copubli-france copubli-europe copubli-univ-france IF 4.9 TC 1 UR https://archimer.ifremer.fr/doc/00823/93481/100222.pdf LA English DT Article DE ;adaptation;bacteria;clonal expansion;molecular evolution AB Crassostrea gigas oysters represent a significant global food source,with 4.7 million tons harvested per year. In 2001, the bacteriumVibrioaestuarianus francensisemerged as a pathogen that causes adult oyster mortality in France and Ireland. Its impact on oyster aquaculture has increased in Europe since its reemergence in 2012. To better understand the evolutionary mechanisms leading to the emergence and persistence over time of this pathogen, we conducted a survey of mollusk diseases through national reference laboratories (NRLs) across Europe. We analyzed54 new genomes of Vibrio aestuarianus(Va) isolated from multiple environmental compartments since 2001, in areas with and withoutbivalve mortalities. We used a combination of comparative genomics and population genetics approaches and show thatVa has a classical epidemic population structure from which the pathogenic Va francensis subspecies emerged and clonally expanded.Furthermore, we identified a specific cus-cop-containing island conferring copper resistance to Va francensiswhose acquisition may have favored the emergence of pathogenic lineages adapted and specialized to oysters. PY 2023 PD JUL SO Molecular Ecology SN 0962-1083 PU Wiley VL 32 IS 11 UT 000961583100001 BP 2869 EP 2883 DI 10.1111/mec.16910 ID 93481 ER EF