Draft-genome sequence data and phylogenomic comparison of two marine-sourced bacterial strains Pseudoalteromonas sp. MIP2626 and Psychrobacter sp. BI730

Type Article
Date 2020-08
Language English
Author(s) Kothe Caroline1, Delbarre-Ladrat ChristineORCID2, Renault Pierre1, Passerini DelphineORCID2
Affiliation(s) 1 : Micalis Institute, INRAE, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, 78350, France
2 : Ifremer, BRM, EM3B Laboratory, F‐44311 Nantes, France
Source Data In Brief (2352-3409) (Elsevier BV), 2020-08 , Vol. 31 , P. 105898 (7p.)
DOI 10.1016/j.dib.2020.105898
Keyword(s) Aquatic, Genomic, Phylogenetic analysis, Halophilic
Abstract

Halophilic and psychrophilic marine bacteria are source of interesting bioactive molecules for biotechnology. We report here the whole-genome sequences of two of them, Pseudoalteromonas sp. MIP2626 isolated from tropical peeled shrimps and Psychrobacter sp. BI730 isolated from deep-sea hydrothermal vent. Sequencing of both genomes was performed by Illumina HiSeq platform (2 × 150 pb). De novo assemblies using Spades v3.9 generated 136 contigs for Pseudoalteromonas MIP2626 and 42 contigs for Psychrobacter BI730, representing a genome size of 3.9 Mb and 3.2 Mb, respectively. Phylogenetic based on 16S rRNA gene sequence and phylogenomic analyses were reported to compare the new sequences with Pseudoalteromonas and Psychrobacter representative strains available in the public databases. The genome sequences have been deposited at GenBank under the accession numbers JAATTW000000000 for Pseudoalteromonas sp. MIP2626 and JAATTV000000000 for Psychrobacter sp. BI730.

Full Text
File Pages Size Access
Publisher's official version 11 1 MB Open access
Supplementary materials 958 bytes Open access
Top of the page

How to cite 

Kothe Caroline, Delbarre-Ladrat Christine, Renault Pierre, Passerini Delphine (2020). Draft-genome sequence data and phylogenomic comparison of two marine-sourced bacterial strains Pseudoalteromonas sp. MIP2626 and Psychrobacter sp. BI730. Data In Brief, 31, 105898 (7p.). Publisher's official version : https://doi.org/10.1016/j.dib.2020.105898 , Open Access version : https://archimer.ifremer.fr/doc/00635/74662/