Epigenetically facilitated mutational assimilation: epigenetics as a hub within the inclusive evolutionary synthesis

Type Article
Date 2019-02
Language English
Author(s) Danchin Etienne1, Pocheville Arnaud1, 2, 3, Rey Olivier4, 5, Pujol Benoit1, Blanchet Simon1, 4
Affiliation(s) 1 : Univ Toulouse Midi Pyrenees, Lab Evolut & Diversite Biol, CNRS, EDB UMR 5174,IRD,UPS, 118 Route Narbonne,Bat 4R1, F-31062 Toulouse 9, France.
2 : Univ Sydney, Dept Philosophy, Sydney, NSW 2006, Australia.
3 : Univ Sydney, Charles Perkins Ctr, Sydney, NSW 2006, Australia.
4 : SETE, CNRS, UMR5321, F-09200 Moulis, France.
5 : Univ Montpellier, Univ Perpignan, IFREMER, CNRS,IHPE UMR 5244, Via Domitia, F-66860 Perpignan, France.
Source Biological Reviews (1464-7931) (Wiley), 2019-02 , Vol. 94 , N. 1 , P. 259-282
DOI 10.1111/brv.12453
WOS© Times Cited 62
Keyword(s) non-genetic inheritance, inclusive heritability, epigenetics, central dogma, genetic assimilation, mutation randomness, inclusive evolutionary synthesis
Abstract

After decades of debate about the existence of non-genetic inheritance, the focus is now slowly shifting towards dissecting its underlying mechanisms. Here, we propose a new mechanism that, by integrating non-genetic and genetic inheritance, may help build the long-sought inclusive vision of evolution. After briefly reviewing the wealth of evidence documenting the existence and ubiquity of non-genetic inheritance in a table, we review the categories of mechanisms of parent-offspring resemblance that underlie inheritance. We then review several lines of argument for the existence of interactions between non-genetic and genetic components of inheritance, leading to a discussion of the contrasting timescales of action of non-genetic and genetic inheritance. This raises the question of how the fidelity of the inheritance system can match the rate of environmental variation. This question is central to understanding the role of different inheritance systems in evolution. We then review and interpret evidence indicating the existence of shifts from inheritance systems with low to higher transmission fidelity. Based on results from different research fields we propose a conceptual hypothesis linking genetic and non-genetic inheritance systems. According to this hypothesis, over the course of generations, shifts among information systems allow gradual matching between the rate of environmental change and the inheritance fidelity of the corresponding response. A striking conclusion from our review is that documented shifts between types of inherited non-genetic information converge towards epigenetics (i.e. inclusively heritable molecular variation in gene expression without change in DNA sequence). We then interpret the well-documented mutagenicity of epigenetic marks as potentially generating a final shift from epigenetic to genetic encoding. This sequence of shifts suggests the existence of a relay in inheritance systems from relatively labile ones to gradually more persistent modes of inheritance, a relay that could constitute a new mechanistic basis for the long-proposed, but still poorly documented, hypothesis of genetic assimilation. A profound difference between the genocentric and the inclusive vision of heredity revealed by the genetic assimilation relay proposed here lies in the fact that a given form of inheritance can affect the rate of change of other inheritance systems. To explore the consequences of such inter-connection among inheritance systems, we briefly review published theoretical models to build a model of genetic assimilation focusing on the shift in the engraving of environmentally induced phenotypic variation into the DNA sequence. According to this hypothesis, when environmental change remains stable over a sufficient number of generations, the relay among inheritance systems has the potential to generate a form of genetic assimilation. In this hypothesis, epigenetics appears as a hub by which non-genetically inherited environmentally induced variation in traits can become genetically encoded over generations, in a form of epigenetically facilitated mutational assimilation. Finally, we illustrate some of the major implications of our hypothetical framework, concerning mutation randomness, the central dogma of molecular biology, concepts of inheritance and the curing of inherited disorders, as well as for the emergence of the inclusive evolutionary synthesis.

Full Text
File Pages Size Access
Publisher's official version 24 1 MB Open access
Table S1. A description of published models of non‐genetic inheritance and genetic assimilation. Table S2. Description of the model parameters. 6 212 KB Open access
Top of the page

How to cite 

Danchin Etienne, Pocheville Arnaud, Rey Olivier, Pujol Benoit, Blanchet Simon (2019). Epigenetically facilitated mutational assimilation: epigenetics as a hub within the inclusive evolutionary synthesis. Biological Reviews, 94(1), 259-282. Publisher's official version : https://doi.org/10.1111/brv.12453 , Open Access version : https://archimer.ifremer.fr/doc/00479/59037/